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Machine learning and AI Summer School

24-29 August 2025 - Geetbets, BE
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Machine learning and AI Summer School

Machine learning and AI Summer School

Organized in partnership with SIB

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We are thrilled to announce the upcoming Machine Learning in Life Science Summer School, a collaborative effort by VIB and SIB. Set in the outskirts of the picturesque town of Diest, Belgium, this event will run from the late afternoon of August 24th, 2025, to after lunch on August 29th, 2025.

Our summer school will delve into four pioneering topics:

  • Protein Language Models
  • Spatial Omics Data Analysis
  • Data Integration and LLMs
  • Deep Learning for Protein Structures Prediction

You can submit your motivation before Tuesday 29 April here.

Given the rapid advancements in AI, driven by increased data availability, computing power, and new methodologies, this training is more relevant than ever. The development of foundation models and the accessibility of vast omics data have highlighted the need for sophisticated analysis techniques beyond classical statistics.

Experienced professionals will guide around 4 diverse groups of 8-10 participants. The format will be a hackathon style, with around 20 contact hours dedicated to hands-on training and collaborative problem-solving. In addition to group work, we have planned inspiring lectures on the latest advancements in Machine Learning and AI in Life Sciences.

Recognizing the importance of equipping researchers with the necessary knowledge and skills to leverage these technologies, our week-long training will cover foundational concepts, deep learning, and generative AI techniques.

To foster a sense of community and provide a break from the intensive sessions, we have also organized a social activity on Wednesday afternoon.

Join us for this high-intensity, hands-on course and be part of a transformative learning experience!

Practical info:

  • We expect an intermediate level of ML knowledge.
  • Previous practical experience with ML in Python is recommended.
  • A survey following the application will be sent to the applicants to determine their background knowledge.
  • Tickets also include accommodation and meals.

The campaign visual is from Freepik.

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Confirmed speakers

Lars Borm
Lars Borm - VIB Training & Conferences
Lars Borm

Lars Borm

VIB.AI & Center for Brain & Disease Research & KU Leuven, BE

Program

Day 0 - Sunday, 24 August, 2025

18:00
19:00
Welcome + check-in
Kasteel
19:00
20:30
Dinner
Kasteel
20:30
Icebreaker activity

Day 1 - Monday, 25 August, 2025

08:00
09:00
Breakfast
Kasteel
09:00
09:15
Welcome
Houtschuur
09:15
10:15
Topics - 10 min presentation
Houtschuur
10:15
12:30
Hackathon

4-5 tracks in parallel with the 4 topics:

Protein Language Models

Janna Hastings

University of Zurich, CH; SIB Swiss Institute of Bioinformatics, CH
Oostschuur
Protein Structure Prediction & Deep Learning
Koewachtershuis
12:30
13:30
Lunch
Kasteel
14:00
14:45
Lecture
Houtschuur
14:00
14:45
Towards scalable and interactive pipelines for spatial biology
14:45
17:30
Hackathon

4-5 tracks in parallel with the 4 topics:

Protein Language Models

Janna Hastings

University of Zurich, CH; SIB Swiss Institute of Bioinformatics, CH
Oostschuur
Protein Structure Prediction & Deep Learning
Koewachtershuis
17:30
17:40
Recap
Houtschuur
19:00
20:00
Dinner
Kasteel

Day 2 - Tuesday, 26 August, 2025

08:00
09:00
Breakfast
Kasteel
09:00
09:45
Lecture
Houtschuur
09:00
09:45
Prior Knowledge and Biological AI

Janna Hastings

University of Zurich, CH; SIB Swiss Institute of Bioinformatics, CH
09:45
12:30
Hackathon

4-5 tracks in parallel with the 4 topics:

Protein Language Models

Janna Hastings

University of Zurich, CH; SIB Swiss Institute of Bioinformatics, CH
Oostschuur
Protein Structure Prediction & Deep Learning
Koewachtershuis
12:30
13:30
Lunch
Kasteel
14:00
14:45
Lecture
Houtschuur
14:00
14:45
Modeling the regulatory genome using deep learning
14:45
17:30
Hackathon

4-5 tracks in parallel with the 4 topics:

Protein Language Models

Janna Hastings

University of Zurich, CH; SIB Swiss Institute of Bioinformatics, CH
Oostschuur
Protein Structure Prediction & Deep Learning
Koewachtershuis
17:30
17:40
Recap
Houtschuur
19:00
20:00
Dinner
Kasteel

Day 3 - Wednesday, 27 August, 2025

08:00
09:00
Breakfast
Kasteel
09:00
09:45
Lecture
Houtschuur
09:00
09:45
De novo design of membrane proteins and nanopores
09:45
12:30
Hackathon

4-5 tracks in parallel with the 4 topics:

Protein Language Models

Janna Hastings

University of Zurich, CH; SIB Swiss Institute of Bioinformatics, CH
Oostschuur
Protein Structure Prediction & Deep Learning
Koewachtershuis
12:30
13:30
Lunch
Kasteel
14:00
17:00
Social activity
19:00
20:00
Dinner
Kasteel

Day 4 - Thursday, 28 August, 2025

08:00
09:00
Breakfast
Kasteel
09:00
12:30
Hackathon

4-5 tracks in parallel with the 4 topics:

Protein Language Models

Janna Hastings

University of Zurich, CH; SIB Swiss Institute of Bioinformatics, CH
Oostschuur
Protein Structure Prediction & Deep Learning
Koewachtershuis
12:30
13:30
Lunch
Kasteel
14:00
14:45
Lecture
Houtschuur
14:00
14:45
Paragliding with AI: Multimodal Adventures in RNA Biology and Digital Pathology
14:45
17:30
Hackathon

4-5 tracks in parallel with the 4 topics:

Protein Language Models

Janna Hastings

University of Zurich, CH; SIB Swiss Institute of Bioinformatics, CH
Oostschuur
Protein Structure Prediction & Deep Learning
Koewachtershuis
17:30
17:40
Recap
Houtschuur
19:00
20:00
BBQ
Kasteel

Day 5 - Friday, 29 August, 2025

08:00
09:00
Breakfast + check-out
Kasteel
09:00
10:30
Projects preparation
Houtschuur
10:30
11:00
Coffee break
Kasteel
11:00
13:00
Projects presentation
Houtschuur
13:00
14:15
Lunch
Kasteel

Organizing committee

Attendees

The full list of attendees will be available on 24-07-2025 until 29-11-2025
This list will only be available for registered attendees of the event.